output-file

FoldX uses output-file as a tag to label different outputs from different commands in batch runs.

BuildModel output:

After running BuildModel you'll get three files to look at. Given output-file="TAG" the output files are.

Average_TAG_BM.fxout -> average energy of the different runs

Dif_TAG_BM.fxout -> energy difference between reference WT and the corresponding mutant

Raw_TAG_BM.fxout -> full energy decomposition for the WT references and the mutants

PdbList_TAG_BM.fxout -> names of all the mutants and the corresponding WT references

 By default ouput-file is setted to the first pdbId from the batch run

DNAScan output:

After running DNAScan you'll get three files to look at. Given output-file="TAG" the output files are.

DS_TAG.fxout -> average energy of the different runs

Dif_TAG_BM.fxout -> energy difference between reference WT and the corresponding mutant

Raw_TAG_BM.fxout -> full energy decomposition for the WT references and the mutants

PdbList_TAG_BM.fxout -> names of all the mutants and the corresponding WT references

 By default ouput-file is setted to the first pdbId from the batch run

parameter Description Type Default Value
output-file output file tag to label multiple output files string first pdbId