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Biblio

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FOLDX PAPERS

Lyu Q, Lin Y, Pan Y, et al. "The polymorphism analysis for CD36 among platelet donors." Sci Rep. 2024;14(1):8534.
Fan S, Lü X, Wei X, et al. "Computational design of α-amylase from to increase its activity and stability at high temperatures." Comput Struct Biotechnol J. 2024;23:982-989.
Huang A, Chen Z, Wu X, Yan W, Lu F, Liu F. "Improving the thermal stability and catalytic activity of ulvan lyase by the combination of FoldX and KnowVolution campaign." Int J Biol Macromol. 2024;257(Pt 1):128577.
Ozden B, amiloğlu EŞ, zsan AÖ, et al. "Benchmarking the accuracy of structure-based binding affinity predictors on Spike-ACE2 deep mutational interaction set." Proteins. 2024;92(4):529-539.
Goettig P, Chen X, Harris JM. "Correlation of Experimental and Calculated Inhibition Constants of Protease Inhibitor Complexes." Int J Mol Sci. 2024;25(4).
Mamata M, Padma G, T Laxmi P, Saroja K, Ashwin D, Suman J. "Identification of a Novel Variant in Gene Resulting in a Beta Null Phenotype in a Proband with Thalassemia Intermedia." Hemoglobin. 2024;48(1):1-3.
Parvar SJamshidi, Hall BA, Shorthouse D. "Interpreting the effect of mutations to protein binding sites from large-scale genomic screens." Methods. 2024;222:122-132.
Darshan VMDatta, Arumugam N, Almansour AI, Sivaramakrishnan V, Kanchi S. "In silico energetic and molecular dynamic simulations studies demonstrate potential effect of the point mutations with implications for protein engineering in BDNF." Int J Biol Macromol. 2024:132247.
Wu X, Hone AJ, Huang Y-H, et al. "Computational Design of α-Conotoxins to Target Specific Nicotinic Acetylcholine Receptor Subtypes." Chemistry. 2024;30(7):e202302909.
G Sankari S, James R, Payva F, et al. "Computational analysis of sodium-dependent phosphate transporter SLC20A1/PiT1 gene identifies missense variations C573F, and T58A as high-risk deleterious SNPs." J Biomol Struct Dyn. 2024;42(8):4072-4086.
Xu S-Y, Chu R-L, Liu H-T, Weng C-Y, Wang Y-J, Zheng Y-G. "Computer-directed rational design enhanced the thermostability of carbonyl reductase LsCR for the synthesis of ticagrelor precursor." Biotechnol Bioeng. 2024;121(5):1532-1542.
Paul R, Kasahara K, Sasaki J, et al. "Unveiling the affinity-stability relationship in anti-measles virus antibodies: a computational approach for hotspots prediction." Front Mol Biosci. 2023;10:1302737.
Li Z, Zhao C, Li D, Wang L. "Enhancing the thermostability of Streptomyces cyaneofuscatus strain Ms1 tyrosinase by multi-factors rational design and molecular dynamics simulations." PLoS One. 2023;18(7):e0288929.
Koşaca M, Yılmazbilek İ, Karaca E. "PROT-ON: A structure-based detection of designer PROTein interface MutatiONs." Front Mol Biosci. 2023;10:1063971.
Hajihassan Z, Saray MMohammadpo, Yaseri A. "Engineering a CEACAM1 Variant with the Increased Binding Affinity to TIM-3 Receptor." Iran Biomed J. 2023;27(4):191-8.
Liu Y, Sheng W, Hou S, et al. "Functional Characterization of a Novel SLC4A4 Variant and Uniparental Isodisomy in Proximal Renal Tubular Acidosis Patient." Biochem Genet. 2023.
Hong X, Lv J, Li Z, Xiong Y, Zhang J, Chen H-F. "Sequence-based machine learning method for predicting the effects of phosphorylation on protein-protein interactions." Int J Biol Macromol. 2023;243:125233.

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