Biblio
Found 150 results
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2024. Improving the thermal stability and catalytic activity of ulvan lyase by the combination of FoldX and KnowVolution campaign.. Int J Biol Macromol. 257(Pt 1):128577.
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2024. The polymorphism analysis for CD36 among platelet donors.. Sci Rep. 14(1):8534.
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2023. Bacterial expression of a designed single-chain IL-10 prevents severe lung inflammation.. Mol Syst Biol. 19(1):e11037.
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2023. In silico engineering a CD80 variant with increased affinity to CTLA-4 and decreased affinity to CD28 for optimized cancer immunotherapy.. J Immunol Methods. 513:113425.
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2023. A novel variant in ALG1 gene associated with congenital disorder of glycosylation: A case report and short literature review.. Mol Genet Genomic Med. 11(8):e2197.
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2023. PROT-ON: A structure-based detection of designer PROTein interface MutatiONs.. Front Mol Biosci. 10:1063971.
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2023. Statistical modeling to quantify the uncertainty of FoldX-predicted protein folding and binding stability.. BMC Bioinformatics. 24(1):426.
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2023. Structural modeling and analyses of genetic variations in the human XPC nucleotide excision repair protein.. J Biomol Struct Dyn. :1-28.
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2023. Structural systems biology approach delineate the functional implications of SNPs in exon junction complex interaction network.. J Biomol Struct Dyn. :1-18.
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2023. Structure-based prediction of Ras-effector binding affinities and design of "branchegetic" interface mutations.. Structure. 31(7):870-883.e5.
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2022. Best templates outperform homology models in predicting the impact of mutations on protein stability.. Bioinformatics. 38(18):4312-4320.
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2022. Crystal structure of a Burkholderia peptidase and modification of the substrate-binding site for enhanced hydrolytic activity toward gluten-derived pro-immunogenic peptides.. Int J Biol Macromol. 222(Pt B):2258-2269.
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2022. Defining the HIV Capsid Binding Site of Nucleoporin 153.. mSphere. 7(5):e0031022.
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2022. Development of an Outward Proton Pumping Rhodopsin with a New Record in Thermostability by Means of Amino Acid Mutations.. J Phys Chem B. 126(5):1004-1015.
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2022. Disulfide Bond Engineering for Enhancing the Thermostability of the Maltotetraose-Forming Amylase from STB07.. Foods. 11(9)
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2022. The effect of mutations on binding interactions between the SARS-CoV-2 receptor binding domain and neutralizing antibodies B38 and CB6.. Sci Rep. 12(1):18819.
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2022. Evolutionary and structural constraints influencing apolipoprotein A-I amyloid behavior.. Proteins. 90(1):258-269.
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2022. Experimental and Analysis of TEM β-Lactamase Adaptive Evolution.. ACS Infect Dis. 8(12):2451-2463.
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2022. [Improving the thermal stability of lipase based on multiple computational design strategies].. Sheng Wu Gong Cheng Xue Bao. 38(4):1537-1553.
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2022. Molecular Modeling Predicts Novel Antibody Escape Mutations in the Respiratory Syncytial Virus Fusion Glycoprotein.. J Virol. 96(13):e0035322.
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2022. MotSASi: Functional short linear motifs (SLiMs) prediction based on genomic single nucleotide variants and structural data.. Biochimie. 197:59-73.
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2022. MutateX: an automated pipeline for in silico saturation mutagenesis of protein structures and structural ensembles.. Brief Bioinform. 23(3)
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2022. Protposer: The web server that readily proposes protein stabilizing mutations with high PPV.. Comput Struct Biotechnol J. 20:2415-2433.
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2022. pyFoldX: enabling biomolecular analysis and engineering along structural ensembles.. Bioinformatics. 38(8):2353-2355.
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2022. Recombination of Single Beneficial Substitutions Obtained from Protein Engineering by Computer-Assisted Recombination (CompassR).. Methods Mol Biol. 2461:9-18.