Biblio
Found 159 results
Evolutionary and structural constraints influencing apolipoprotein A-I amyloid behavior.. Proteins. 90(1):258-269.
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2022. Experimental and Analysis of TEM β-Lactamase Adaptive Evolution.. ACS Infect Dis. 8(12):2451-2463.
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2022. [Improving the thermal stability of lipase based on multiple computational design strategies].. Sheng Wu Gong Cheng Xue Bao. 38(4):1537-1553.
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2022. Molecular Modeling Predicts Novel Antibody Escape Mutations in the Respiratory Syncytial Virus Fusion Glycoprotein.. J Virol. 96(13):e0035322.
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2022. MotSASi: Functional short linear motifs (SLiMs) prediction based on genomic single nucleotide variants and structural data.. Biochimie. 197:59-73.
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2022. MutateX: an automated pipeline for in silico saturation mutagenesis of protein structures and structural ensembles.. Brief Bioinform. 23(3)
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2022. Protposer: The web server that readily proposes protein stabilizing mutations with high PPV.. Comput Struct Biotechnol J. 20:2415-2433.
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2022. pyFoldX: enabling biomolecular analysis and engineering along structural ensembles.. Bioinformatics. 38(8):2353-2355.
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2022. Recombination of Single Beneficial Substitutions Obtained from Protein Engineering by Computer-Assisted Recombination (CompassR).. Methods Mol Biol. 2461:9-18.
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2022. Site-wise Diversification of Combinatorial Libraries Using Insights from Structure-guided Stability Calculations.. Methods Mol Biol. 2491:63-73.
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2022. Structural and Functional Impact of Damaging Nonsynonymous Single Nucleotide Polymorphisms (nsSNPs) on Human VPS35 Protein Using Computational Approaches.. IEEE/ACM Trans Comput Biol Bioinform. 19(6):3715-3724.
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2022. Thermodynamic analysis of amyloid fibril structures reveals a common framework for stability in amyloid polymorphs.. Structure. 30(8):1178-1189.e3.
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2022. Analysis and Interpretation of the Impact of Missense Variants in Cancer.. Int J Mol Sci. 22(11)
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2021. Cohesin-dockerin code in cellulosomal dual binding modes and its allosteric regulation by proline isomerization.. Structure. 29(6):587-597.e8.
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2021. Comparison of the pH- and thermally-induced fluctuations of a therapeutic antibody Fab fragment by molecular dynamics simulation.. Comput Struct Biotechnol J. 19:2726-2741.
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2021. Computational design of noncanonical amino acid-based thioether staples at N/C-terminal domains of multi-modular pullulanase for thermostabilization in enzyme catalysis.. Comput Struct Biotechnol J. 19:577-585.
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2021. Engineering a variant of IL-17RA with high binding affinity to IL-17A for optimized immunotherapy.. Biotechnol Rep (Amst). 32:e00682.
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2021. Engineering of Biological Pathways: Complex Formation and Signal Transduction.. Methods Mol Biol. 2315:59-70.
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2021. Improved thermostability of proteinase K and recognizing the synergistic effect of Rosetta and FoldX approaches.. Protein Eng Des Sel. 34
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2021. Interactions of Globular and Ribbon [γ4E]GID with α4β2 Neuronal Nicotinic Acetylcholine Receptor.. Mar Drugs. 19(9)
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2021. Mechanism evaluation for an amino acid substitution p.Y246C of B-glycosyltransferase enzyme with Bweak phenotype.. Vox Sang. 116(4):464-470.
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2021. Population genetic analysis of the Plasmodium falciparum erythrocyte binding antigen-175 (EBA-175) gene in Equatorial Guinea.. Malar J. 20(1):374.
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2021. Protein-protein interaction and in silico mutagenesis studies on IL17A and its peptide inhibitor.. 3 Biotech. 11(6):305.
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2021. Seq12, Seq12m, and Seq13m, peptide analogues of the spike glycoprotein shows antiviral properties against SARS-CoV-2: An study through molecular docking, molecular dynamics simulation, and MM-PB/GBSA calculations.. J Mol Struct. 1246:131113.
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2021. Stability Prediction for Mutations in the Cytosolic Domains of Cystic Fibrosis Transmembrane Conductance Regulator.. J Chem Inf Model. 61(4):1762-1777.
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