Biblio

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2018
Khan NSaba, Verma R, Pradhan D, Nayek A, Bhuyan R, Sahu TKumar, Jain AKumar.  2018.  Analysis of interleukin 23 and 7G10 interactions for computational design of lead antibodies against immune-mediated inflammatory diseases.. J Recept Signal Transduct Res. 38(4):327-334.
Anyndita NVeronica M, Dluha N, Rifa'i M, Himmah K, Wahyuningsih MDwi.  2018.  Designing and overproducing a tandem epitope of gp350/220 that shows a potential to become an EBV vaccine.. Heliyon. 4(3):e00564.
Choi Y, Furlon JM, Amos RB, Griswold KE, Bailey-Kellogg C.  2018.  DisruPPI: structure-based computational redesign algorithm for protein binding disruption.. Bioinformatics. 34(13):i245-i253.
Wojciechowski M, Różycki B, Huy PDinh Quoc, Li MSuan, Bayer EA, Cieplak M.  2018.  Dual binding in cohesin-dockerin complexes: the energy landscape and the role of short, terminal segments of the dockerin module.. Sci Rep. 8(1):5051.
oštarić NŠ, O'Reilly FJ, Giansanti P, Heck AJR, Gavin A-C, van Noort V.  2018.  Effects of Acetylation and Phosphorylation on Subunit Interactions in Three Large Eukaryotic Complexes.. Mol Cell Proteomics. 17(12):2387-2401.
Blanco JDelgado, Radusky L, Climente-González H, Serrano L.  2018.  FoldX accurate structural protein-DNA binding prediction using PADA1 (Protein Assisted DNA Assembly 1).. Nucleic Acids Res.
Buß O, Rudat J, Ochsenreither K.  2018.  FoldX as Protein Engineering Tool: Better Than Random Based Approaches? Comput Struct Biotechnol J. 16:25-33.
Carleton LA, Chakravarthy R, van der Sloot AM, Mnich K, Serrano L, Samali A, Gorman AM.  2018.  Generation of rationally-designed nerve growth factor (NGF) variants with receptor specificity.. Biochem Biophys Res Commun. 495(1):700-705.
Sumbalova L, Stourac J, Martinek T, Bednar D, Damborsky J.  2018.  HotSpot Wizard 3.0: web server for automated design of mutations and smart libraries based on sequence input information.. Nucleic Acids Res. 46(W1):W356-W362.
Buß O, Muller D, Jager S, Rudat J, Rabe KS.  2018.  Improvement in the Thermostability of a β-Amino Acid Converting ω-Transaminase by Using FoldX.. Chembiochem. 19(4):379-387.
Ang T-F, Salleh ABakar, Normi YM, Leow TChor.  2018.  In silico design of potentially functional artificial metallo-haloalkane dehalogenase containing catalytic zinc.. 3 Biotech. 8(7):314.
Rojas-Rengifo DF, Alvarez-Silva MCamila, Ulloa-Guerrero CP, Nuñez-Velez VLucía, Delgado MDel Pilar, Aguilera SMilena, Castro H, Jaramillo CAlberto, Barrios AFernando G.  2018.  Intramolecular energies of the cytotoxic protein CagA of Helicobacter pylori as a possible descriptor of strains' pathogenicity level.. Comput Biol Chem. 76:17-22.
Yenenler A, Venturini A, Burduroglu HCahit, Sezerman OUğur.  2018.  Investigating the structural properties of the active conformation BTL2 of a lipase from Geobacillus thermocatenulatus in toluene using molecular dynamic simulations and engineering BTL2 via in-silico mutation.. J Mol Model. 24(9):229.
Okumura A, Maruyama K, Shibata M, Kurahashi H, Ishii A, Numoto S, Hirose S, Kawai T, Iso M, Kataoka S et al..  2018.  A patient with a GNAO1 mutation with decreased spontaneous movements, hypotonia, and dystonic features.. Brain Dev.
Goethe M, Gleixner J, Fita I, J Rubi M.  2018.  Prediction of Protein Configurational Entropy (Popcoen).. J Chem Theory Comput. 14(3):1811-1819.
Hutapea HMartogi Lo, Maladan Y.  2018.  Relationship between HIV integrase polymorphisms and integrase inhibitor susceptibility: An analysis.. Heliyon. 4(12):e00956.
Usmanova DR, Bogatyreva NS, Bernad JAriño, Eremina AA, Gorshkova AA, Kanevskiy GM, Lonishin LR, Meister AV, Yakupova AG, Kondrashov FA et al..  2018.  Self-consistency test reveals systematic bias in programs for prediction change of stability upon mutation.. Bioinformatics.
Azadi S, Tafazzoli-Shadpour M, Omidvar R.  2018.  [Steered Molecular Dynamics Simulation Study of Quantified Effects of Point Mutation Induced by Breast Cancer on Mechanical Behavior of E-Cadherin].. Mol Biol (Mosk). 52(5):836-845.